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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW11718 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | NAC | ||||||||
| Protein Properties | Length: 319aa MW: 37075.6 Da PI: 7.1244 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 173.3 | 7.1e-54 | 10 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98
+ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+evd++++ePwdL+ k ++ + ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++++++++
OIW11718 10 VPPGFRFHPTDEELLYYYLRKKVSYEAIDL-DVIREVDLNRLEPWDLKdKcRIGSgPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHSNSK 109
69****************************.9***************943444443456****************************************** PP
NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128
+g++ktLvfy+grap+g+kt+W+mheyrl
OIW11718 110 RIGMRKTLVFYTGRAPHGHKTEWIMHEYRL 139
****************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 319 aa Download sequence |
MMPSSGQLTV PPGFRFHPTD EELLYYYLRK KVSYEAIDLD VIREVDLNRL EPWDLKDKCR 60 IGSGPQNEWY FFSHKDKKYP TGTRTNRATT AGFWKATGRD KAIYHSNSKR IGMRKTLVFY 120 TGRAPHGHKT EWIMHEYRLD EDDAEVQEDG WVVCRVFKKK NQNRSYQQEI EEEDHHFTHM 180 RTTGPSQILE PKHHHMQGLY DYNNFDGSLH LPQLFSPESA IAPTHSMASP MNAMDILECS 240 QNLLRLTTTD ACGHNLMHQQ QQHGERFNGD WSFLDKLLAS HNNNPPTHHD AAPSVGISAQ 300 KFPFHYLGCD THDIMKFSK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G79580.1 | 1e-108 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW11718 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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