PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW11793
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 205aa    MW: 23062.6 Da    PI: 7.1637
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW11793genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF67.81e-213884349
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
               enks r vtfskR+ g++KKA ELS+LC++ev v++fs  gk y +
  OIW11793 38 MENKSSRLVTFSKRKSGLFKKAMELSILCGVEVVVLLFSVGGKAYSF 84
              79*****************************************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MFQLLAYISL VPYLIPSQYL ASGKEETMSH RKIEMKLMEN KSSRLVTFSK RKSGLFKKAM  60
ELSILCGVEV VVLLFSVGGK AYSFGHPSIE AVTKKFLHQG EGSHVSHGES SNDDGNIGKL  120
SHQLQELKDQ IQVEKDKKKE LDKALSKYKF INGKLPIDNL SFEELVEFKA SLVEAQDNMP  180
ASNDELEVAS SLLLFRENRM YETGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.11e-23M-type_MADS family protein