PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW11800

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

AP2

Protein Properties

Length: 581aa MW: 64859.6 Da PI: 6.4037

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW11800	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.6	5.4e-12	257	313	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + ++ ++ k + g ++ +e+Aaka++ a++k++g OIW11800 257 SQYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDKEEKAAKAYDLAALKYWG 313 78*****************433.44555535555.779999************98 PP
2	AP2	48.1	3e-15	356	407	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g OIW11800 356 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 407 78**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MNNWLGFPFT PHLRIDEDFG RENQDHGGGG SYHPHHHLSV MPLHSDGSLC VADSFGHHSA 60 PPQEWRYDNA IGGGNSSEEG PKLEDFLGCY SNSPLAETKV FCQQGTTDQH DRNRNQNQNQ 120 NISKINVNMT PSFSTNNNTE IETRENNNLT NHSSMIQSFH AYNDSRTHAL IPNNNGMYKS 180 WSQQTQFSDA TKQPSAEANG CNFQSLNLTM SPTIQNKVGA ISPLQADDDT RKRSIAKAQA 240 REPVPRKSID TFGQRTSQYR GVTRHRWTGR YEAHLWDNSC RKEGQTRKGR QGGYDKEEKA 300 AKAYDLAALK YWGPTTHINF PLSTYEKEHE EMKHMSRQEF VANLRRKSSG FSRGASVYRG 360 VTRHHQHGRW QARIGRVAGN KDLYLGTFST QEEAAEAYDI AAIKFRGTTA VTNFDISRYD 420 VKRICSSSTL IAGDLAKRSP EDSAPAAADS EDFNSSTSSQ PTPLAITESE RSEELSSMVL 480 NANCDEQAVT ESGNANNVSE SSQEFLPSNK NELNPQSPKS SVGLPNEFGV SGADYGHGYF 540 TLQGPKYDDD DGNNENDHMN NNRIENLGLV NQVPMFALWN E

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MNNWLGFPFT PHLRIDEDFG RENQDHGGGG SYHPHHHLSV MPLHSDGSLC VADSFGHHSA  60
PPQEWRYDNA IGGGNSSEEG PKLEDFLGCY SNSPLAETKV FCQQGTTDQH DRNRNQNQNQ  120
NISKINVNMT PSFSTNNNTE IETRENNNLT NHSSMIQSFH AYNDSRTHAL IPNNNGMYKS  180
WSQQTQFSDA TKQPSAEANG CNFQSLNLTM SPTIQNKVGA ISPLQADDDT RKRSIAKAQA  240
REPVPRKSID TFGQRTSQYR GVTRHRWTGR YEAHLWDNSC RKEGQTRKGR QGGYDKEEKA  300
AKAYDLAALK YWGPTTHINF PLSTYEKEHE EMKHMSRQEF VANLRRKSSG FSRGASVYRG  360
VTRHHQHGRW QARIGRVAGN KDLYLGTFST QEEAAEAYDI AAIKFRGTTA VTNFDISRYD  420
VKRICSSSTL IAGDLAKRSP EDSAPAAADS EDFNSSTSSQ PTPLAITESE RSEELSSMVL  480
NANCDEQAVT ESGNANNVSE SSQEFLPSNK NELNPQSPKS SVGLPNEFGV SGADYGHGYF  540
TLQGPKYDDD DGNNENDHMN NNRIENLGLV NQVPMFALWN E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-109	AP2 family protein

Link Out ? help Back to Top
Ensembl	OIW11800