 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | OIW11857 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
| Family | C2H2 | ||||||||
| Protein Properties | Length: 182aa MW: 20833.5 Da PI: 9.1748 | ||||||||
| Description | C2H2 family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | zf-C2H2 | 15.9 | 3.6e-05 | 20 | 42 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C+k Fs k L H++ H
OIW11857 20 YSCRFCDKKFSAKQALGGHQNAH 42
99******************988 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 182 aa Download sequence |
MASKSSNKGQ GLMEEGERRY SCRFCDKKFS AKQALGGHQN AHKNERATFK RRNILNMAST 60 YIDSYPNLHS YCYPEFTSKG NQMLGVQPQS LIHKNANLFM FKGRPQSSRL EPKFDVNFGQ 120 EQYSSRKDEL NFMHLLGIPQ CVGSKPPLQS SLCDDKSYDQ DNSSLRRPHS ESIEELDLTL 180 KL |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G01860.1 | 2e-11 | C2H2 family protein | ||||
| Link Out ? help Back to Top | |
|---|---|
| Ensembl | OIW11857 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|