PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW11985

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 348aa MW: 39342 Da PI: 4.8831

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW11985	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.4	2.6e-13	166	213	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ ++f L +P + K +Ka+iL+ A++Y+k+Lq OIW11985 166 MDHIMAERKRRQDLTERFIALSATIPGL-----NKTDKASILRAAIDYVKQLQ 213 5699*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MEEESWENWH LHMEMNDDIF LEKCHNEDDD EFLREIFLEQ PPFSFENETN HSSFQNSPTT 60 IVAAATTAIV DGGVIPPMVA SNEHGGEKRP SNTLTPRTCI LSFGDSTMKP ITHEQHQNNY 120 EHLLGDEEKP SSNNQNKRKF GELRPRERVN KNHVGGKKGT NSSQTMDHIM AERKRRQDLT 180 ERFIALSATI PGLNKTDKAS ILRAAIDYVK QLQEKVEKLE KEEKNGSESV ILIKKSDISG 240 NEESTCSETS CEDCCTLPEI EARVLGNEVL IEIHCEKENG IELKLLDQLE NLHLCVTGTS 300 VLPFGNFTLG ITVVAQMSNT YNMTVNDLVK NLRNVIRNSH MPCNSDPY

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MEEESWENWH LHMEMNDDIF LEKCHNEDDD EFLREIFLEQ PPFSFENETN HSSFQNSPTT  60
IVAAATTAIV DGGVIPPMVA SNEHGGEKRP SNTLTPRTCI LSFGDSTMKP ITHEQHQNNY  120
EHLLGDEEKP SSNNQNKRKF GELRPRERVN KNHVGGKKGT NSSQTMDHIM AERKRRQDLT  180
ERFIALSATI PGLNKTDKAS ILRAAIDYVK QLQEKVEKLE KEEKNGSESV ILIKKSDISG  240
NEESTCSETS CEDCCTLPEI EARVLGNEVL IEIHCEKENG IELKLLDQLE NLHLCVTGTS  300
VLPFGNFTLG ITVVAQMSNT YNMTVNDLVK NLRNVIRNSH MPCNSDPY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	172	177	ERKRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	1e-35	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW11985