PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12123

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

NF-YB

Protein Properties

Length: 181aa MW: 19643.7 Da PI: 7.1449

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12123	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	175.6	5e-55	29	122	2	95
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 reqdrflPian+srimkkvlP n+ki+kdak+tvqecvsefisfvtseasdkcqrekrktingddllwa+atlGfedy++ lk+yl++yre ++ OIW12123 29 REQDRFLPIANISRIMKKVLPPNGKIAKDAKDTVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDLLKIYLARYREGDT 122 89****************************************************************************************9665 PP

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence
MSEAPASPGS GGGGGSHENG DHSPRSNHRE QDRFLPIANI SRIMKKVLPP NGKIAKDAKD 60 TVQECVSEFI SFVTSEASDK CQREKRKTIN GDDLLWAMAT LGFEDYIDLL KIYLARYREG 120 DTKGSTKGGD ASSRKDVHPS PNAQGDTKGS TKGGDASSRK DVHPSPNAQA QHMMLPYQDQ 180 E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37060.1	2e-72	NF-YB family protein

Link Out ? help Back to Top
Ensembl	OIW12123