PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12297

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 439aa MW: 48706.7 Da PI: 5.014

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12297	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.1	5.7e-12	254	297	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N+++ Lr+++Pk + K++ a+iL A+eY+k+L OIW12297 254 LMAERRRRKRLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKDL 297 589*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MEEPKLSQEN LPPLPTSSWT IKNDDVSSFK SFLQVNEWFM NSSITQNENF LIQPLNPSFT 60 PTPFFNLNSN NPFTNGFDYG SEPVLLNSNS SILMSFNNNS NILELSSNPE FNPTREVELG 120 GGFDHNTMCV VGEQCHGSGA SNSTFLNHGS VFQQLGTEVP APAFRQGPVD KLGALEIRAA 180 ARLSAMEEME KKRRIGLNDD SDDDDVDEID KYEENVNNGG NNFEGNNNNG DNNNNNGGSQ 240 KGNRKKKVAP AKNLMAERRR RKRLNDRLYM LRSVVPKISK MDRASILGDA IEYLKDLIEK 300 INDLHNELGS TPSGSSLTPP SSFHPVTPSL PTLPSRVKDE LCLSSLATPK SHSPKVEVRL 360 REGRAIDVHM FCACKPGLFL STMRALDSLG LDVQQAVISC FNDFVLDVYR AEQCREGLDL 420 LPEQIKTVLL QAADFRGMM

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MEEPKLSQEN LPPLPTSSWT IKNDDVSSFK SFLQVNEWFM NSSITQNENF LIQPLNPSFT  60
PTPFFNLNSN NPFTNGFDYG SEPVLLNSNS SILMSFNNNS NILELSSNPE FNPTREVELG  120
GGFDHNTMCV VGEQCHGSGA SNSTFLNHGS VFQQLGTEVP APAFRQGPVD KLGALEIRAA  180
ARLSAMEEME KKRRIGLNDD SDDDDVDEID KYEENVNNGG NNFEGNNNNG DNNNNNGGSQ  240
KGNRKKKVAP AKNLMAERRR RKRLNDRLYM LRSVVPKISK MDRASILGDA IEYLKDLIEK  300
INDLHNELGS TPSGSSLTPP SSFHPVTPSL PTLPSRVKDE LCLSSLATPK SHSPKVEVRL  360
REGRAIDVHM FCACKPGLFL STMRALDSLG LDVQQAVISC FNDFVLDVYR AEQCREGLDL  420
LPEQIKTVLL QAADFRGMM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	244	263	RKKKVAPAKNLMAERRRRKR
2	245	264	RKKKVAPAKNLMAERRRRKR
3	257	264	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-82	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW12297