PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW12365
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family NF-YC
Protein Properties Length: 240aa    MW: 28034 Da    PI: 4.6802
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW12365genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC107.77.1e-3429129298
     NF-YC   2 lksfwekq...iekatdfk.nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 
               l++fw +q   i +++ f+ n++lPl+rik+i+kad+dvkm+sae+P +++kace+fi eltlr+w+ +++++  tl+  dia+av++ ++  fl++    
  OIW12365  29 LQQFWVQQlldIRNTEAFRnNKQLPLSRIKRIVKADKDVKMVSAEVPLFMAKACEIFIQELTLRAWILTQDKESCTLQNGDIAKAVQKIHVLHFLTNLLHC 129
               89******88888999998789*************************************************************************987665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MNLISNSTLL PNQFAFSHSH QQDNEKQSLQ QFWVQQLLDI RNTEAFRNNK QLPLSRIKRI  60
VKADKDVKMV SAEVPLFMAK ACEIFIQELT LRAWILTQDK ESCTLQNGDI AKAVQKIHVL  120
HFLTNLLHCD QLQFYEEMVT TNNQIPQSQM MLMHFDPFTY SFFELEETKA GKEENLASLF  180
DVAGSKENTM TNMGMSTCTC MEDKKENIMD EMEATNQEFP QPRMMLSDFD PFQYNFFQPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.13e-33NF-YC family protein