PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12383

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 157aa MW: 17551.8 Da PI: 7.7488

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12383	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	143	8.8e-45	11	109	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC +dCv+apyfp e+p+kf nvhk+FGasnv+kll+++ +++reda++sl+yeAear++dPvyG+vg i+ lq+q+++l++el+++++ OIW12383 11 PCAACKFLRRKCMPDCVFAPYFPPEEPQKFTNVHKIFGASNVSKLLNEVLPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVMKLQKELDATNA 109 7*********************************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 157 aa Download sequence
MASSSSYSNC PCAACKFLRR KCMPDCVFAP YFPPEEPQKF TNVHKIFGAS NVSKLLNEVL 60 PHQREDAVNS LAYEAEARIK DPVYGCVGAI SVLQRQVMKL QKELDATNAD LIRYTCNEMP 120 TTTTIITTSQ RGSERGTSSI AQSSSFYYHS TWNNDHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63090.2	2e-70	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW12383