PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12405

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HD-ZIP

Protein Properties

Length: 261aa MW: 30005.6 Da PI: 4.6817

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12405	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.4	7.8e-21	60	113	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t++q++ Le+ Fe+++++ e+++eLAkklgL+ rqV vWFqNrRa++k OIW12405 60 KKRRLTSDQVHLLEKSFEEENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWK 113 56789************************************************9 PP
2	HD-ZIP_I/II	134.6	3.4e-43	59	150	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+++qv+lLE+sFeee+kLeperK+ela++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd+l ++ +++ k++e+L++e+ OIW12405 59 EKKRRLTSDQVHLLEKSFEEENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDSLLSSYDSIVKDNEKLKSEMV 150 69**************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MDCGRIFFDT SSCRRNNMLF LGNVGRSMMS MEESSKRRPF FSSPDELFDD EYYEEQLPEK 60 KRRLTSDQVH LLEKSFEEEN KLEPERKTEL AKKLGLQPRQ VAVWFQNRRA RWKTKQLERD 120 YDVLKASYDS LLSSYDSIVK DNEKLKSEMV SLHEKLQNEA KDMPEEEPIS DKKTDTLPVN 180 IAEIIRMKVV EDRLSIGSVG SAVVDEGSPR LVVGSDDGSD DGTSYLSDVF VGHETQHQNN 240 EEGEALGWWG NMLHNGAPVL F

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	108	116	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	1e-71	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	OIW12405