PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12442

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HD-ZIP

Protein Properties

Length: 218aa MW: 25551.7 Da PI: 8.488

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12442	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.3	2.6e-18	36	88	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe +++ e++ +LAk lgL++rqV +WFqNrRa++k OIW12442 36 KKRLKLEQVKALEKSFEIGNKLEPERKMQLAKALGLQQRQVAIWFQNRRARWK 88 4557889*********************************************9 PP
2	HD-ZIP_I/II	120.8	7.1e-39	34	126	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekk+rl+ eqvk+LE+sFe +kLeperK++la++Lglq+rqva+WFqnrRAR+ktkqlEk+ye+Lk++++ lk +n++L++++++L+ el++ OIW12442 34 EKKKRLKLEQVKALEKSFEIGNKLEPERKMQLAKALGLQQRQVAIWFQNRRARWKTKQLEKEYEVLKKHFQDLKLDNHNLKAHNQKLHGELQA 126 69**************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MMKRSMSFSG IENNHYDAVH GDDELSEDGS HIGEKKKRLK LEQVKALEKS FEIGNKLEPE 60 RKMQLAKALG LQQRQVAIWF QNRRARWKTK QLEKEYEVLK KHFQDLKLDN HNLKAHNQKL 120 HGELQALKNR ECFESGTISL KKETDQGSWS NASDISSNIN LDLSPKPIMN SPIYSHNGKT 180 LLHNSSRLEL QEESFTNMFH NIEDQQNFWP WPEQNHFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	83	91	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	1e-64	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	OIW12442