PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12552

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 448aa MW: 51159.7 Da PI: 6.5435

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12552	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	85.8	5.2e-27	120	216	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 +Wt+++v++Li+a+++++e+ +++ +kk++W++++k+m+erg+++sp+qC++k+++lnkrykk++++ +++ +++++++ +++d + OIW12552 120 KWTDKMVKLLITAVSYIDEDGSSDGngsgrrkfvflQKKGKWKSIAKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGtSCQVVENPALLDLI 216 7*****************9986446778889999********************************************569999888887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MEGKLSQGGI IQGGTSFGGF GLQGPIQIPH QAQHPHTTHR HQTLRCQGSS VHSSVRDVFH 60 LTTGTLQNCD HTIPMTDFGK GDKSKNSPSE EDEPSFTEDG FDGHHESGRG KKGLPWQRVK 120 WTDKMVKLLI TAVSYIDEDG SSDGNGSGRR KFVFLQKKGK WKSIAKVMAE RGYHVSPQQC 180 EDKFNDLNKR YKKLNDMLGR GTSCQVVENP ALLDLIDYLS EKEKDDVRKI LSSKHLFYEE 240 MCSYHNSNRL HLPHDPALQH SLQLALRNRD DHDNDDTIRS HHDDHDEDDQ DDEVDGHDDF 300 EESYASHGDS RGRYGPLEGS MKKKLKQCQG HENASTFVNP LSCQDHNKRA YADGQIVQSG 360 TNEVLPEGMG AAWSQKQRFE SRSLQLEEQK LQLQSEMLEL EKQRLKWQRF SKKKDQELEK 420 LSLENERMRL ENEHIALELK QKEMGGFN

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MEGKLSQGGI IQGGTSFGGF GLQGPIQIPH QAQHPHTTHR HQTLRCQGSS VHSSVRDVFH  60
LTTGTLQNCD HTIPMTDFGK GDKSKNSPSE EDEPSFTEDG FDGHHESGRG KKGLPWQRVK  120
WTDKMVKLLI TAVSYIDEDG SSDGNGSGRR KFVFLQKKGK WKSIAKVMAE RGYHVSPQQC  180
EDKFNDLNKR YKKLNDMLGR GTSCQVVENP ALLDLIDYLS EKEKDDVRKI LSSKHLFYEE  240
MCSYHNSNRL HLPHDPALQH SLQLALRNRD DHDNDDTIRS HHDDHDEDDQ DDEVDGHDDF  300
EESYASHGDS RGRYGPLEGS MKKKLKQCQG HENASTFVNP LSCQDHNKRA YADGQIVQSG  360
TNEVLPEGMG AAWSQKQRFE SRSLQLEEQK LQLQSEMLEL EKQRLKWQRF SKKKDQELEK  420
LSLENERMRL ENEHIALELK QKEMGGFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-136	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW12552