PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12599

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 511aa MW: 56824.5 Da PI: 6.5028

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12599	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.1	8.5e-07	260	281	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H OIW12599 260 FCTICGKGFKRDANLRMHMRGH 281 6*******************98 PP
2	zf-C2H2	10.8	0.0016	378	393	6	21
TTEEESSHHHHHHHHH CS zf-C2H2 6 CgksFsrksnLkrHir 21 Cg++Fsrk+ L H+ OIW12599 378 CGTTFSRKDKLFGHMA 393 **************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MDPKGSLYDN NWARTSSLTS PGNGLPTNLS SHPPSFYGAK IEAPFKQFNQ ISPTQGLLPG 60 ESNNDIKILD QENFPISDSS QTTKLQDWDP SVMLNNLSFM EEKIHQLQDL VHLIVNKRCQ 120 PFGRPDELVT QEQQLVTADL TSIIVQLIST AGSLLPSVRH TLTNTSPSVG QLSQLRGNTF 180 PFGSGPSSGI RPQNNSGDKF FDQFAQNGVP KNCEVEQNCH IEEHETKDED DAEEGENLPP 240 GSYEILQLEK EEILAPHTHF CTICGKGFKR DANLRMHMRG HGDEYKTPAA LAKPHKESGS 300 EPKLIKRYSC PYAGCKRNKD HKKFQPLKTI LCVKNHYKRT HCDKSYICSR CNTKRFSVLA 360 DLKTHEKHCG KDKWLCSCGT TFSRKDKLFG HMALFQGHTP AIPFDDTKGG PAGALDLEIR 420 ENNSKVGSMN FCFGSNPSSE NGVQNMDVKG NNIDDPTNYF SPMNFEGCNF GGFNEFSQPT 480 FEDSEGSFSF LMSGSFNYAP KIAGETNSDN L

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MDPKGSLYDN NWARTSSLTS PGNGLPTNLS SHPPSFYGAK IEAPFKQFNQ ISPTQGLLPG  60
ESNNDIKILD QENFPISDSS QTTKLQDWDP SVMLNNLSFM EEKIHQLQDL VHLIVNKRCQ  120
PFGRPDELVT QEQQLVTADL TSIIVQLIST AGSLLPSVRH TLTNTSPSVG QLSQLRGNTF  180
PFGSGPSSGI RPQNNSGDKF FDQFAQNGVP KNCEVEQNCH IEEHETKDED DAEEGENLPP  240
GSYEILQLEK EEILAPHTHF CTICGKGFKR DANLRMHMRG HGDEYKTPAA LAKPHKESGS  300
EPKLIKRYSC PYAGCKRNKD HKKFQPLKTI LCVKNHYKRT HCDKSYICSR CNTKRFSVLA  360
DLKTHEKHCG KDKWLCSCGT TFSRKDKLFG HMALFQGHTP AIPFDDTKGG PAGALDLEIR  420
ENNSKVGSMN FCFGSNPSSE NGVQNMDVKG NNIDDPTNYF SPMNFEGCNF GGFNEFSQPT  480
FEDSEGSFSF LMSGSFNYAP KIAGETNSDN L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-175	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW12599