PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12625

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 174aa MW: 19608.2 Da PI: 4.9714

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12625	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00018	16	38	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C C++ F++ L H++ H OIW12625 16 YECVFCKRGFTTAQALGGHMNIH 38 99*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MSSSEETDDM GTGRSYECVF CKRGFTTAQA LGGHMNIHRK DRANNNKVKP NFLPSSSSKV 60 VDDNNYSDLG FYSPIPNHLV AEGNNYNNNT YYYSTITPDL EVDTTDNNYH PFYFPSHTCG 120 TSPSSNLGNQ KDRRHLFGQD WSQNLSLYTN SDKIEDNTEE GGGLDLELRL GYHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43540.1	4e-16	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW12625