PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12650

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 476aa MW: 52538.7 Da PI: 9.276

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12650	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.3e-05	79	101	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H OIW12650 79 FVCEICNKGFQRDQNLQLHRRGH 101 89*******************88 PP
2	zf-C2H2	11.6	0.00084	155	177	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ OIW12650 155 WKCDKCSKIYAVQSDWKAHSKTC 177 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MFPAVMSNST SISEEASVLS SGARIHQDLG GLNNLVSSIS PQKQPQLKIK KKRSLPGNPD 60 PDAEVIALSP KTLLATNRFV CEICNKGFQR DQNLQLHRRG HNLPWKLKQR SNKEVKKKAY 120 VCPEASCVHH NPSRALGDLT GIKKHYCRKH GEKKWKCDKC SKIYAVQSDW KAHSKTCGTR 180 EYRCDCGTLF SRKDSFITHR AFCDALAEES ARMSANQIAN NTTNPLPQSL FCFPSQQQNF 240 QNQFTTLNPW DPSHENPNPS NITTAFHNIK PEAQNFHIPH NNNSNNSPSF LHHSKGIITS 300 SPFRNLYMHS QNSSNSVTSA YLSATALLQK AATVGASAIT GPNASTTVSV GGDQQQHVTH 360 HVTQLSMGEF GTMAQLNNSV IPDHHHYINM KGLSKNETRD FLGLANGGGG RGDSGGNAVE 420 VSINVKDMLT FTGNVEYQNH HQPYEHHLHS SQFKSQQQGG FGFIGTTTAP ESWGNC

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MFPAVMSNST SISEEASVLS SGARIHQDLG GLNNLVSSIS PQKQPQLKIK KKRSLPGNPD  60
PDAEVIALSP KTLLATNRFV CEICNKGFQR DQNLQLHRRG HNLPWKLKQR SNKEVKKKAY  120
VCPEASCVHH NPSRALGDLT GIKKHYCRKH GEKKWKCDKC SKIYAVQSDW KAHSKTCGTR  180
EYRCDCGTLF SRKDSFITHR AFCDALAEES ARMSANQIAN NTTNPLPQSL FCFPSQQQNF  240
QNQFTTLNPW DPSHENPNPS NITTAFHNIK PEAQNFHIPH NNNSNNSPSF LHHSKGIITS  300
SPFRNLYMHS QNSSNSVTSA YLSATALLQK AATVGASAIT GPNASTTVSV GGDQQQHVTH  360
HVTQLSMGEF GTMAQLNNSV IPDHHHYINM KGLSKNETRD FLGLANGGGG RGDSGGNAVE  420
VSINVKDMLT FTGNVEYQNH HQPYEHHLHS SQFKSQQQGG FGFIGTTTAP ESWGNC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-111	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW12650