PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12675

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 666aa MW: 74593.2 Da PI: 5.6594

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12675	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.8	1.9e-13	465	511	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h +ErrRR+++N++f L++l+P +K++Ka+iL ++eY+k L OIW12675 465 TTHVLAERRRREKLNERFIILKSLVPFV-----TKMDKASILGDTIEYVKLL 511 79***********************8.....8*************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 666 aa Download sequence
MAVAPLCSSR LQSMLKATVQ SVQWTYSIFW QLCPQQEILV WEDGHYNGAI KTRKTVQTME 60 VGGDEEGTLQ RSKQLRELYE SLSVVETNTH TRCSFAALSP EDLTESEWFY LMCVSFSFAP 120 GEGLPGKAYA KRQHIWLVGA DEVDNKTFSR AILAKTVVCI PVSDGVVELG TTDKVQEDLN 180 FIEHIKTFFT DVHNFHHHPP PPKLALSEHS TSNPASSSDH FHAVMYTAAD PTTTNILKHD 240 GINVDDDEDE CETETEDERG YNTHQTLNAK MAEPSELMQV EMAEDIRIGS SNDGSNNLDS 300 DFHFIAVTQT GYPSSISDSV PTQGSLQPPS GNLSTLGTVI PLLPLEDMTQ EDTHYSQTLS 360 NILQNQYTCW VESPSISYNT YSTFQSAFTN CNIFPNHHHH LLPKAALDGT SQRLLKCILF 420 TAPYLHAKNH VEKYSPQTLD TATDSGGDLA AQIRGKGIPQ DEHSTTHVLA ERRRREKLNE 480 RFIILKSLVP FVTKMDKASI LGDTIEYVKL LRRRIQDLEA RNLQILEKEE QRSKNTDIIE 540 MQRACTSSST KEQQRSGVTV MVGTNKRKVR IVERNDEEAL TSVQVSIIES DALLELECPH 600 REGLLLDVIQ KLRELRIEVI GMKSSLNNGV LVAELRAKVK GNVKGKKVCI VEVKTALSQI 660 IPQTIQ

Sequence ? help Back to Top

Protein Sequence Length: 666 aa Download sequence

MAVAPLCSSR LQSMLKATVQ SVQWTYSIFW QLCPQQEILV WEDGHYNGAI KTRKTVQTME  60
VGGDEEGTLQ RSKQLRELYE SLSVVETNTH TRCSFAALSP EDLTESEWFY LMCVSFSFAP  120
GEGLPGKAYA KRQHIWLVGA DEVDNKTFSR AILAKTVVCI PVSDGVVELG TTDKVQEDLN  180
FIEHIKTFFT DVHNFHHHPP PPKLALSEHS TSNPASSSDH FHAVMYTAAD PTTTNILKHD  240
GINVDDDEDE CETETEDERG YNTHQTLNAK MAEPSELMQV EMAEDIRIGS SNDGSNNLDS  300
DFHFIAVTQT GYPSSISDSV PTQGSLQPPS GNLSTLGTVI PLLPLEDMTQ EDTHYSQTLS  360
NILQNQYTCW VESPSISYNT YSTFQSAFTN CNIFPNHHHH LLPKAALDGT SQRLLKCILF  420
TAPYLHAKNH VEKYSPQTLD TATDSGGDLA AQIRGKGIPQ DEHSTTHVLA ERRRREKLNE  480
RFIILKSLVP FVTKMDKASI LGDTIEYVKL LRRRIQDLEA RNLQILEKEE QRSKNTDIIE  540
MQRACTSSST KEQQRSGVTV MVGTNKRKVR IVERNDEEAL TSVQVSIIES DALLELECPH  600
REGLLLDVIQ KLRELRIEVI GMKSSLNNGV LVAELRAKVK GNVKGKKVCI VEVKTALSQI  660
IPQTIQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	471	476	ERRRRE
2	472	477	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	6e-85	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW12675