PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12757

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 245aa MW: 25965.9 Da PI: 10.1492

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12757	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	121.8	7.9e-38	20	113	3	95
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa 95 +kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++ ++s + +++ ss+++ +s++ OIW12757 20 VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPATFSsLSVSLRGVSNSFSSPSSTSSHH 113 79*************************************************************9999966642222222222122222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MSNSDGTPNG VTTTTTSLSV KKPPSKDRHS KVDGRGRRIR MPIICAARVF QLTRELGHKS 60 DGQTIEWLLR QAEPSIIAAT GTGTTPATFS SLSVSLRGVS NSFSSPSSTS SHHHKTLLTT 120 TPFILGKRIH TNDDDGSVTA KDDAVSAGSF VGSASPAGLW ALPARPDFGQ IWSFAAAAAP 180 PPEMVSVSQQ QQQASFFLHQ QQQQQVAMGE ASAARLGNYL PGHLNLLASL SGGHGNSGRR 240 EDEQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	7e-71	TCP family protein

Link Out ? help Back to Top
Ensembl	OIW12757