PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12789

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 162aa MW: 18169.8 Da PI: 9.3935

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12789	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0013	30	52	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H OIW12789 30 FECKTCNRQFPSFQALGGHRASH 52 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MANYLMLFSR GGEFETTYFN TSNNNNNRVF ECKTCNRQFP SFQALGGHRA SHKKLRLMGQ 60 EKDQMVHDSP TPKAKTHECS ICGLEFAIGQ ALGGHMRRHR VPSSSNGDMQ SSITSLSCSV 120 DTKKKKGNSK KVLFLDLNLT PLENDIEILK IRETIPLVGC FN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	9e-35	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW12789