PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12863

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 234aa MW: 26149 Da PI: 8.3866

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12863	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.00071	90	112	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k Fs+ L H +H OIW12863 90 HRCSVCNKAFSSYQALGGHKASH 112 79**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MALEALNSPT PFRGSSYKEE EQHEVDLHAW TKRKRSKRPR LENSTTEEEY FALCLIMLAQ 60 NGNTNTKNDN KTFLQQQQHE SSPPMKVISH RCSVCNKAFS SYQALGGHKA SHRKSLSENA 120 ATTVATVSAA TTNDTATKKL HECSICHKSF PTGQALGGHK RCHYDGGNSN SYINTNNSSA 180 VTFFESGSFS HSHRGFEFDL NLPAPLTEFW DLARFDDEKK VKFNETVSLG LVKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	1e-42	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW12863