PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW12929

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 307aa MW: 35310.6 Da PI: 5.2086

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW12929	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.5	1.2e-16	20	67	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll+++++ +G g+W+ a+ g++R++k+c++rw++yl OIW12929 20 RGPWTLEEDSLLIHYITCHGEGRWNMLAKSAGLKRSGKSCRLRWLNYL 67 89********************************************97 PP
2	Myb_DNA-binding	52.6	1.1e-16	73	116	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++ OIW12929 73 RGNLTPQEQLLILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 116 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MSISTKRELG SNEEESELRR GPWTLEEDSL LIHYITCHGE GRWNMLAKSA GLKRSGKSCR 60 LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKIAQ HLPGRTDNEI KNYWRTRVQK 120 QARQLNIESG SKRFIDAVKC FWMPRLLQKM EQDSFLSSYS SMTNMNFGNS AEASTSSIST 180 TSNIPYLPSP TPPQELFIDA ANANHLSSMS NHTNASLNLD SLQFSQLLEI SEQPTCPPNM 240 FENNVYNNPI QDNWYVDTNN YGMQGLNMEP LQVMESYDIP EFAFQAEGND EWILDNIGDT 300 LWNMNAM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68320.1	4e-84	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW12929