PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW12936
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family LBD
Protein Properties Length: 204aa    MW: 22545.7 Da    PI: 6.9735
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW12936genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26088.67.9e-284107199
    DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 
               +C++C++lr++C ++Cv++p++     p++q++++ +++k++G++ +++l++a+pe+ r+d+++sl+ eA+ r+ +P yG++g++++++++ ++++++++l
  OIW12936   4 SCNGCRILRKGCGDNCVIRPCLewinsPESQANATMFLAKFYGRTALVNLISAAPEHLRTDVFKSLLHEACGRLVNPTYGSMGLLWSGEWNRCEAAVDAVL 104
               6***********************************************************************************************99988 PP

    DUF260  97 lke 99 
               +++
  OIW12936 105 TGS 107
               776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MKVSCNGCRI LRKGCGDNCV IRPCLEWINS PESQANATMF LAKFYGRTAL VNLISAAPEH  60
LRTDVFKSLL HEACGRLVNP TYGSMGLLWS GEWNRCEAAV DAVLTGSRIL DVAGFDWHAT  120
RTHVGGAENI FPTCDIRHVP RARDMDNVGE RGRSKRARRN FKATPQLGVV DSPENESMET  180
VEQPLNQGVA ETELNLELTL AFPC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67100.19e-58LBD family protein