PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW12957
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MYB
Protein Properties Length: 228aa    MW: 26448.4 Da    PI: 8.7965
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW12957genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.43.9e-091762245
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      rWT   d+l+ +a    + +   +W++Ia++++ g+++ ++k+++ 
         OIW12957 17 SRWTHHQDKLFERALVVVPENtpdRWEKIAEKVQ-GKSAAEVKEHYD 62
                     59*****************99*************.**********95 PP
2Myb_DNA-binding49.78.6e-16113157347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++d+  ++G+g+W++I+r +  +Rt+ q+ s+ qky
         OIW12957 113 PWTEEEHRLFLDGLSKFGKGDWRSISRNVVVTRTPTQVASHAQKY 157
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MFHDSTTMPT RWPTHPSRWT HHQDKLFERA LVVVPENTPD RWEKIAEKVQ GKSAAEVKEH  60
YDDLVHDVFE IDSGRVAVPE YTDESSSAWN SSNQISFMSK RKYGDSERKK GTPWTEEEHR  120
LFLDGLSKFG KGDWRSISRN VVVTRTPTQV ASHAQKYFLR QKSIKKERKR SSIHDITTVD  180
SNSVSVPMDQ NRVPPPGRPM QHSQEMQFNP INNLHDQMGG FGYSNYDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.18e-68MYB family protein