PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW13033

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

NF-YC

Protein Properties

Length: 117aa MW: 13400.4 Da PI: 4.6457

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13033	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	127.5	4.7e-40	1	76	26	101
NF-YC 26 ikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdel 101 +kki+k+dedv+misae+Pv +++ace+fileltlrsw+h eenkrrtl+k+dia+a++rtd+fdflvdivpr++l OIW13033 1 MKKIMKTDEDVHMISAEVPVTFARACEMFILELTLRSWNHEEENKRRTLQKNDIATAINRTDMFDFLVDIVPREDL 76 59***********************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 117 aa Download sequence
MKKIMKTDED VHMISAEVPV TFARACEMFI LELTLRSWNH EEENKRRTLQ KNDIATAINR 60 TDMFDFLVDI VPREDLKDEV LASIPKETIP GAGRLSDGFP YCNMPPQDAP HLELLVS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	46	52	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	5e-56	NF-YC family protein

Link Out ? help Back to Top
Ensembl	OIW13033