PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW13044

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 526aa MW: 57060.4 Da PI: 8.3753

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13044	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	101	121	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H OIW13044 101 CEICNKGFQRDQNLQLHRRGH 121 *******************88 PP
2	zf-C2H2	11.1	0.0012	175	197	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + OIW13044 175 WKCDKCSKKYAVQSDWKAHSKIC 197 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MSNITSCDSV SFSTENTRED AVKQQLEILG QFNSPNSTSH TSTTTTTTNN NNNYYSNVSN 60 TSSQPLSSAK RKRSLPGNPD PSAEVIALSP NALMATNRFL CEICNKGFQR DQNLQLHRRG 120 HNLPWKLKQR TSTEIRKRVY VCPEPSCVHH NPARALGDLT GIKKHFCRKH GEKKWKCDKC 180 SKKYAVQSDW KAHSKICGTR EYKCDCGTLF SRRDSFITHR AFCDALAEEN NKGNEGQLSK 240 MDSNLQCQSI PNLVPSLPIN TNIIPIPQIG GTASEFNNKN NPLSSLQIPA SSKAFNMAIR 300 NSSPSLQLSS NILASHESSS LMSATALLQK AAQMGATVSN NNSNVSTTMA PPSYGLVQLQ 360 QPPPNNVYSF MNHYMQQQQH DHISSHYNSF NAHHEMSTGD NAEGIVVGMN GGDMFNVILD 420 QSKALSKIID QNSRSINNGV LHQTNGGSSG GALNIGGETK GSGDVMTLDL LGIGGGDGGS 480 GENMHGNLNI YGGGAQQDET AAADDFWRNW STKNAGFGSF SASSSM

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MSNITSCDSV SFSTENTRED AVKQQLEILG QFNSPNSTSH TSTTTTTTNN NNNYYSNVSN  60
TSSQPLSSAK RKRSLPGNPD PSAEVIALSP NALMATNRFL CEICNKGFQR DQNLQLHRRG  120
HNLPWKLKQR TSTEIRKRVY VCPEPSCVHH NPARALGDLT GIKKHFCRKH GEKKWKCDKC  180
SKKYAVQSDW KAHSKICGTR EYKCDCGTLF SRRDSFITHR AFCDALAEEN NKGNEGQLSK  240
MDSNLQCQSI PNLVPSLPIN TNIIPIPQIG GTASEFNNKN NPLSSLQIPA SSKAFNMAIR  300
NSSPSLQLSS NILASHESSS LMSATALLQK AAQMGATVSN NNSNVSTTMA PPSYGLVQLQ  360
QPPPNNVYSF MNHYMQQQQH DHISSHYNSF NAHHEMSTGD NAEGIVVGMN GGDMFNVILD  420
QSKALSKIID QNSRSINNGV LHQTNGGSSG GALNIGGETK GSGDVMTLDL LGIGGGDGGS  480
GENMHGNLNI YGGGAQQDET AAADDFWRNW STKNAGFGSF SASSSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-101	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW13044