PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW13080

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 800aa MW: 90221 Da PI: 4.5562

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13080	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.3	0.00015	608	645	13	55
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R++i +++ eLr ++P+ +K s + Le++ +Y+ +Lq OIW13080 608 RQQIQDCIKELRGIIPNG-----EKYSIDSLLEQTHKYMYYLQ 645 89************96.....6999999******99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 800 aa Download sequence
MFGGDTNAFI KEEHFRKYKT TYEGLKNRPK DIPESHFKEL IRYWSFGNIQ CATKENKEMP 60 NQAEMFCETR QSKKGEPLDQ ETTNAMGDFG LHQEFSSGIK TIVAIPVKEC GVVQFGSKMK 120 ILERVEFLDQ TQRLLMEIDN VGMVNMSGNA VSPLDCEKYD LNSFLASFSS ENSFDSNLKY 180 AHGENSEDLM RKVYSYESVN NPFPSLYNIY QEGMTLFNVD SCVDDQLNAT KEAQVALSDR 240 DITDMLLRPN SSVNNIISNG ADFGEWSDEH SYFDSFGQQL VSADENAFSC SELAVQDSPL 300 SSMYSMNIGA CPENLHKSLA NQQSSQSGVL TQVDFTSSSN TPYEISMNIE AVDMSEEFLN 360 FSSMDDLCQW FAPSPDDNNF RTIIAVDNTH SELNEHNPIS LSTLGCDIPM TCLAGAESIE 420 TSAVMHGPQN SLLDFNCDQA NEWWENMPTP ALSPANFSEC ISELNTCTVT GTQNGLLFSE 480 SLSGEASYNP LSSSNFEHAF SPDIRQLVEF APVNINPIQL GNLARPAEAT SDSTGSISYL 540 EKTNNLITKK DTFQKLQVPR WIDDGHSTNM GKSVSAHYQT QKPEEGTTRR SKKRARPKES 600 TQPRPKDRQQ IQDCIKELRG IIPNGEKYSI DSLLEQTHKY MYYLQSVTKY AEKLQEPIEL 660 KLIEQANEVV LEDSNVGDNK NHGVTWTFDL ASPTMECPIR VEDMNTPGQM LIEMFCEQGG 720 FFLEIAGEIR DFGLNILKAK MTVRKNKLWA LFIVQVYIVQ QAKRHLTRID VFYFLFNLLH 780 RTQKSRMDSA NNIAKVIDPT

Sequence ? help Back to Top

Protein Sequence Length: 800 aa Download sequence

MFGGDTNAFI KEEHFRKYKT TYEGLKNRPK DIPESHFKEL IRYWSFGNIQ CATKENKEMP  60
NQAEMFCETR QSKKGEPLDQ ETTNAMGDFG LHQEFSSGIK TIVAIPVKEC GVVQFGSKMK  120
ILERVEFLDQ TQRLLMEIDN VGMVNMSGNA VSPLDCEKYD LNSFLASFSS ENSFDSNLKY  180
AHGENSEDLM RKVYSYESVN NPFPSLYNIY QEGMTLFNVD SCVDDQLNAT KEAQVALSDR  240
DITDMLLRPN SSVNNIISNG ADFGEWSDEH SYFDSFGQQL VSADENAFSC SELAVQDSPL  300
SSMYSMNIGA CPENLHKSLA NQQSSQSGVL TQVDFTSSSN TPYEISMNIE AVDMSEEFLN  360
FSSMDDLCQW FAPSPDDNNF RTIIAVDNTH SELNEHNPIS LSTLGCDIPM TCLAGAESIE  420
TSAVMHGPQN SLLDFNCDQA NEWWENMPTP ALSPANFSEC ISELNTCTVT GTQNGLLFSE  480
SLSGEASYNP LSSSNFEHAF SPDIRQLVEF APVNINPIQL GNLARPAEAT SDSTGSISYL  540
EKTNNLITKK DTFQKLQVPR WIDDGHSTNM GKSVSAHYQT QKPEEGTTRR SKKRARPKES  600
TQPRPKDRQQ IQDCIKELRG IIPNGEKYSI DSLLEQTHKY MYYLQSVTKY AEKLQEPIEL  660
KLIEQANEVV LEDSNVGDNK NHGVTWTFDL ASPTMECPIR VEDMNTPGQM LIEMFCEQGG  720
FFLEIAGEIR DFGLNILKAK MTVRKNKLWA LFIVQVYIVQ QAKRHLTRID VFYFLFNLLH  780
RTQKSRMDSA NNIAKVIDPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	8e-36	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW13080