PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW13175

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 296aa MW: 32867.3 Da PI: 5.968

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13175	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00024	175	197	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H OIW13175 175 HECSICGAEFTSGQALGGHMRRH 197 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MEATEEVSLG GTKEQINIVK GKRTKRVRPQ SPIPFSMTAI FSTGEGEKRY HNTSNLLGGV 60 EPVATQFSVG NQFYNIKDNN DNNSSNTPTT SSGGLQDSTN EEEDMANCLI LLAQGQSRES 120 PKHAAADGRE DLTTGGMNYN EEEFQFKTNN NRPISLQFNI RGNLYSTNNN KCKVHECSIC 180 GAEFTSGQAL GGHMRRHRAP VGTNTTLSLT PMALEPEEDQ QPRKRRNVLP LNLDLNLPAP 240 EPQDCPTESK FALAPKQQQQ GQTQQQLQQQ QQQQLQQQQQ QSSLVFSTPS LVDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	5e-30	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW13175