PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW13194
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family RAV
Protein Properties Length: 313aa    MW: 34729.2 Da    PI: 7.8267
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW13194genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2262.3e-0848812555
       AP2 25 ng...krkrfslgkfgtaeeAakaaiaarkkleg 55
              ng   k++r+++g+f  ++eAa+a++ a+ +++g
  OIW13194 48 NGiyeKHQRVWVGTFNDEDEAARAYDIAAVRFRG 81
              7777677**********99***********9998 PP
2B390.31.5e-28160268198
               EEEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
               f+k+ tpsd +k+++lv+pk++ae++               ++++ l +ed  g++W+++++y+++s++yvltkGW +Fvk++ Lk+gD+v F+ +   ++
  OIW13194 160 FEKTVTPSDIGKLNLLVIPKQHAEKNfplcggnspwtAAAAAKEVVLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWTRFVKEKSLKAGDTVRFYQSCGPDR 260
               99****************************8777777444559999************************************************8777888 PP

               ..EEEEE- CS
        B3  91 elvvkvfr 98 
               +l++ + +
  OIW13194 261 QLYIDIKN 268
               78887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MEGVSCTDET TTTNDSLSIS LLLKLYSPSP RNTLNGVGSG TSTVVDPNGI YEKHQRVWVG  60
TFNDEDEAAR AYDIAAVRFR GKDAVTNFKT FSCDVAEIEF LNSHSKSEIV NMLRKHTYHD  120
EMLHSKNSTW WKQRRSLDNA ATTSFGIGSV CEMKAYEILF EKTVTPSDIG KLNLLVIPKQ  180
HAEKNFPLCG GNSPWTAAAA AKEVVLNFED VGGKVWRFRY SYWNSSQSYV LTKGWTRFVK  240
EKSLKAGDTV RFYQSCGPDR QLYIDIKNRS GDVGANVCGL YIPAGPEVEP IQIVRLFGVN  300
LLKQPGSDAV GGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13260.17e-97RAV family protein