PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW13202

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 524aa MW: 56790.7 Da PI: 8.524

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13202	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	59.6	7.7e-19	121	222	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm................rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +W++ + +L++a++e+ ++l+rg+l++ +Weev++++ r++++ +s +qCk+k++nl+kryk + ++ ++ s+s++ +f+++ OIW13202 121 EWSDTAIACLLDAYTEKFNQLNRGNLRGRDWEEVAEAVgercgaavaggggrcdRKHKCYKSVEQCKNKIDNLKKRYKVEVQRIGNF-GISTSHWHWFKKM 220 5*****************************************************************************9999986.677789***** PP trihelix 86 ea 87 ea OIW13202 221 EA 222 85 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MATRDYSPLD SPPHAQPHLQ ASTRHHFPSP SSSTPPPDST TADYYHHPSF SDIADDSSDH 60 AKSTSAVNTP NSKRSSSAGP TAGGNGSYHY NKKKSKPSSS SGGTFHDSSF HGGDYRKDRE 120 EWSDTAIACL LDAYTEKFNQ LNRGNLRGRD WEEVAEAVGE RCGAAVAGGG GRCDRKHKCY 180 KSVEQCKNKI DNLKKRYKVE VQRIGNFGIS TSHWHWFKKM EAIVGNYVTV KIVSDDERGL 240 SNSSYMARQS KNRYAPSNAI VATNLKPKPT SNLKWHRVLF KISGSALAGN CQNIDPKVAM 300 QIAREVATAC RLGVEVAIVV GGRNFFCGDA WVSSTGLDRP TAYQIGMMAT VMNSILLQSA 360 LEKLGVEACV QSVFSIPEAA EPYSRQRAIR HLEKGRVVIF GGVGAGTGNP LFTTDTAAAL 420 RASELNADVV LKGTNVNGVL DSNPRNDGVT LDHISFREVV SRGLTSISMD MMALAYCEEN 480 GIPVVIFNML EPGNVSRALC GDQVGTLIDQ TGRVEHRIPG SSCI

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MATRDYSPLD SPPHAQPHLQ ASTRHHFPSP SSSTPPPDST TADYYHHPSF SDIADDSSDH  60
AKSTSAVNTP NSKRSSSAGP TAGGNGSYHY NKKKSKPSSS SGGTFHDSSF HGGDYRKDRE  120
EWSDTAIACL LDAYTEKFNQ LNRGNLRGRD WEEVAEAVGE RCGAAVAGGG GRCDRKHKCY  180
KSVEQCKNKI DNLKKRYKVE VQRIGNFGIS TSHWHWFKKM EAIVGNYVTV KIVSDDERGL  240
SNSSYMARQS KNRYAPSNAI VATNLKPKPT SNLKWHRVLF KISGSALAGN CQNIDPKVAM  300
QIAREVATAC RLGVEVAIVV GGRNFFCGDA WVSSTGLDRP TAYQIGMMAT VMNSILLQSA  360
LEKLGVEACV QSVFSIPEAA EPYSRQRAIR HLEKGRVVIF GGVGAGTGNP LFTTDTAAAL  420
RASELNADVV LKGTNVNGVL DSNPRNDGVT LDHISFREVV SRGLTSISMD MMALAYCEEN  480
GIPVVIFNML EPGNVSRALC GDQVGTLIDQ TGRVEHRIPG SSCI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	1e-165	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW13202