PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW13238

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 466aa MW: 52816.2 Da PI: 6.0729

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13238	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.0007	54	76	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k+F++ L H r+H OIW13238 54 HECNICFKTFKNGKALGGHRRSH 76 78*******************99 PP
2	zf-C2H2	11.9	0.00071	120	142	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C C+k F+++++L H+r+H OIW13238 120 HTCYLCKKDFPSSHSLYGHMRSH 142 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MNKVKDDQEV SYDDGEPYEE ELVKIERSSD DNNNKVVVAV TEAQKNSSGE VAMHECNICF 60 KTFKNGKALG GHRRSHFQAA KVKSHFSNLS KTTRTNNKNN KKVVSDDDDD SDSDDNDGKH 120 TCYLCKKDFP SSHSLYGHMR SHPERVWRGI CPPIHSDHKY NSNNNNNNKH SSSSSSRIYD 180 LEDDYDYGDD CDEVVAPAID LSKSYSLPRW QQTGKRGRQS TSAYEAAEIL VFMSLRYNKS 240 FASDESMVDE PKSPESLIIS YKRKNTGEAS TSQTHAPKMI KFNVSDSLKL ENQNDGCDSY 300 KDERVSLNMD CKEEIEKDSG SISIKESTQD HSFGVRKKMM KKVNGLLLKK PKGQDSESED 360 KNFLSKESTQ KKVDGYKCDI CLKSFLTFQG LGGHRSIHNR KKNNVLNIAE SKYSDPIADD 420 DDDAMRGPVM EEANDKFHTE DASSSQFRVP KFLDFDLNML PDDMHD

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MNKVKDDQEV SYDDGEPYEE ELVKIERSSD DNNNKVVVAV TEAQKNSSGE VAMHECNICF  60
KTFKNGKALG GHRRSHFQAA KVKSHFSNLS KTTRTNNKNN KKVVSDDDDD SDSDDNDGKH  120
TCYLCKKDFP SSHSLYGHMR SHPERVWRGI CPPIHSDHKY NSNNNNNNKH SSSSSSRIYD  180
LEDDYDYGDD CDEVVAPAID LSKSYSLPRW QQTGKRGRQS TSAYEAAEIL VFMSLRYNKS  240
FASDESMVDE PKSPESLIIS YKRKNTGEAS TSQTHAPKMI KFNVSDSLKL ENQNDGCDSY  300
KDERVSLNMD CKEEIEKDSG SISIKESTQD HSFGVRKKMM KKVNGLLLKK PKGQDSESED  360
KNFLSKESTQ KKVDGYKCDI CLKSFLTFQG LGGHRSIHNR KKNNVLNIAE SKYSDPIADD  420
DDDAMRGPVM EEANDKFHTE DASSSQFRVP KFLDFDLNML PDDMHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26940.1	4e-13	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW13238