PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW13342

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 212aa MW: 23733.6 Da PI: 9.8993

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13342	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00073	98	120	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C ksF ++ L H++ H OIW13342 98 YPCSLCEKSFLTPQALGGHQNGH 120 99****************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MSNNVSTHNQ LPNKEKRKAS EYPEVNLRSS KKMVIDQQSA SKNQEKGKGL SVVEEPEVTH 60 DKNKVTLEEE PNASNNSKYP KIFGVILIPF KGMQKGPYPC SLCEKSFLTP QALGGHQNGH 120 KWEQTIKQSK EGIQLFMASN NKHSNFPSFQ GDGLGGTFQL AGRNSFNDGT MYFSQNISAR 180 FNNEFGTRHM NEAKEIQSSG KSGFDFTFFA KK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57520.1	1e-10	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW13342