PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW13351

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

DBB

Protein Properties

Length: 325aa MW: 36660.9 Da PI: 4.948

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13351	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.5	2.4e-07	8	49	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 +r+C+ + + ++ l+C+ ++ lC +C e H+ Ht OIW13351 8 NRRCDYCAKTKALLYCRADSAKLCFSCDREVHSTnqlfskHT 49 689****99*******************6677777776 PP
2	zf-B_box	27.4	6.9e-09	53	95	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg.....Htvvpl 42 C+++++ ++++ C + ++ lC++C e+H++ H+++pl OIW13351 53 LCDTCDDSPATILCSTESSVLCQNCDWEKHNNssssvHERRPL 95 6*****************************9899999999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MSASSFHNRR CDYCAKTKAL LYCRADSAKL CFSCDREVHS TNQLFSKHTR FLLCDTCDDS 60 PATILCSTES SVLCQNCDWE KHNNSSSSVH ERRPLEGFNG CPCVNELLAI VGFEDVGKKY 120 LLSSDLESGD GFLEYEIEGI SDLFVWDAPS VVSMDDLIST SGSSHNYQAM EVPPLPKNRK 180 VACGKHKEEV LNQLSKLAKS EPLELDNEQY VPLENLFTGF EDNLEADLFP SFEWHGESSE 240 HINQVVPLQP DTSVRAYTEE VQVKHSTSVW ETHTFAENGG TPSHSLVTET LPTTPKSVPC 300 ELTSQERDSA LLRYKQKKKT RRYYY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	316	322	QKKKTRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.2	9e-72	DBB family protein

Link Out ? help Back to Top
Ensembl	OIW13351