PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW13561

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

NF-YC

Protein Properties

Length: 620aa MW: 68581.3 Da PI: 6.7184

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13561	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	176.1	3.4e-55	439	542	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 ql++fw++q ie++tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflvdivpr OIW13561 439 QLQQFWANQyqeIEQVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR 539 89****9999*************************************************************************************** PP NF-YC 99 del 101 ++l OIW13561 540 EDL 542 987 PP

Sequence ? help Back to Top
Protein Sequence Length: 620 aa Download sequence
MAAVTLLSLG NGAPDVFSSL AALRSGQPRT GLGAILSAGA FVSALVVGFV AIYAAPFSVD 60 PAPFIRDVLF YLTSALFLFY VYLSAEIFLW QAIGFVGFYV FFVGFVFYMD LGIGDRRVKI 120 GNESVSDLEQ QKELITSHQE QVKRRSSRFR RAFELISKLW EVPVSTLLKL TIPQPAPSQW 180 SRFYASANIA LCPLALLYAC NSIMPFNHPI VFLLPNTHFP LWSVVLTTSF SLAFLHFIIE 240 KEPPKTEQLP VVVTAFVMSV FWISTTAGEL VNCLEAIGIL LKLPPAILGL TVLAWGNSVG 300 DLVADVAVAK AGHPAMAMAG CFAGPMFNML VGLGSALVIQ TANIYPRAYE LNFHCVGVYL 360 FDFTWNRMDH QGHGQNPNMG VPYGSNPYQQ SQMTGAPGSV VTSAGNMQST GQPTGAQLGQ 420 HQLAYQHIHQ QQQQQLQQQL QQFWANQYQE IEQVTDFKNH SLPLARIKKI MKADEDVRMI 480 SAEAPVIFAR ACEMFILELT LRSWNHTEEN KRRTLQKNDI AAAITRTDIF DFLVDIVPRE 540 DLKDEVLASI PRGAMPVAGP ADALPYMYMQ PQHAPQAGAP GVIMGKPVMD PSMYAQQPHP 600 YMAPQMWPRP QDQQPSSPDH

Sequence ? help Back to Top

Protein Sequence Length: 620 aa Download sequence

MAAVTLLSLG NGAPDVFSSL AALRSGQPRT GLGAILSAGA FVSALVVGFV AIYAAPFSVD  60
PAPFIRDVLF YLTSALFLFY VYLSAEIFLW QAIGFVGFYV FFVGFVFYMD LGIGDRRVKI  120
GNESVSDLEQ QKELITSHQE QVKRRSSRFR RAFELISKLW EVPVSTLLKL TIPQPAPSQW  180
SRFYASANIA LCPLALLYAC NSIMPFNHPI VFLLPNTHFP LWSVVLTTSF SLAFLHFIIE  240
KEPPKTEQLP VVVTAFVMSV FWISTTAGEL VNCLEAIGIL LKLPPAILGL TVLAWGNSVG  300
DLVADVAVAK AGHPAMAMAG CFAGPMFNML VGLGSALVIQ TANIYPRAYE LNFHCVGVYL  360
FDFTWNRMDH QGHGQNPNMG VPYGSNPYQQ SQMTGAPGSV VTSAGNMQST GQPTGAQLGQ  420
HQLAYQHIHQ QQQQQLQQQL QQFWANQYQE IEQVTDFKNH SLPLARIKKI MKADEDVRMI  480
SAEAPVIFAR ACEMFILELT LRSWNHTEEN KRRTLQKNDI AAAITRTDIF DFLVDIVPRE  540
DLKDEVLASI PRGAMPVAGP ADALPYMYMQ PQHAPQAGAP GVIMGKPVMD PSMYAQQPHP  600
YMAPQMWPRP QDQQPSSPDH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	512	518	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	3e-80	NF-YC family protein

Link Out ? help Back to Top
Ensembl	OIW13561