PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW13904

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 172aa MW: 18895.7 Da PI: 8.8867

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW13904	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	143	8.8e-45	15	114	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrrkC +dCv+apyfpa++p+kfanvhk+FGasnv k+l++lp ++r da+ss+vyeA+ar+rdPvyG+vg+i++lqq+++ l+++la++++e OIW13904 15 PCAACKLLRRKCGQDCVFAPYFPANEPHKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGTISSLQQHIHMLQTQLAQAQAE 114 7**********************************************************************************************99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MKEGMSGRKH GAVTPCAACK LLRRKCGQDC VFAPYFPANE PHKFANVHKV FGASNVNKML 60 QDLPMHQRGD AVSSMVYEAN ARVRDPVYGC VGTISSLQQH IHMLQTQLAQ AQAEVVHLKA 120 RQTRCNSNLG LSPNSPTNSC SPSSKIMGSY AKPIFDMDMV VDHAIYSDSI WS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31320.1	3e-67	LBD family protein

Link Out ? help Back to Top
Ensembl	OIW13904