PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW14009
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 229aa    MW: 26381.1 Da    PI: 9.1437
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW14009genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF53.62.9e-171152344
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
              i ++s+r+ t+ kR+ng+ KK +E+S+LC++e++ ii++++ 
  OIW14009 11 IADDSKRKATYKKRKNGLVKKTNEISILCGIEACAIIYGPNE 52
              8899***********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MTRNKVKLTY IADDSKRKAT YKKRKNGLVK KTNEISILCG IEACAIIYGP NETQPEVWPS  60
HPEVQRVINK FKTMPEHEQN KYMLNQESFL TKSIMKTRDQ LKKLRNENKK IEMELFMFQC  120
LSTGSTNNMV DSNDLLCVIN QTLKEIEWKK SRVQPQQGTV EASNGAKPLN EENTFVDAHN  180
HIQGMMQTNM GPMQMQDWSF DSANGGGNVM LPFRDYNISN GFWHGPSFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.11e-43M-type_MADS family protein