PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW14010
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 232aa    MW: 26474 Da    PI: 5.0038
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW14010genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF44.32.3e-141150342
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
              ie++s+r++t  kR++ ++KK +ELS+LC++e++ iif +
  OIW14010 11 IEDDSKRKITCKKRKASLIKKVNELSTLCGIEACAIIFDP 50
              9************************************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MASNKGELTY IEDDSKRKIT CKKRKASLIK KVNELSTLCG IEACAIIFDP SASQPEIWPS  60
HSEVERLINK FMEMPEMEQR KYMYNQESFL SKNFNKAQDQ LKRLRDENKR MEMEIFMFQC  120
LNIGCIVNTA NMVDTNYLLF VINQTLKDIQ WKQSRDQRQH GTVVAASKEE PLNEEVGSVD  180
GPVHGVEQTN MGAMQIQDWS SDSTNDGGNM MLPSGDNNNL SNGFWPSTPS FP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.12e-39M-type_MADS family protein