PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW14056
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 159aa    MW: 18665.6 Da    PI: 10.474
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW14056genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF44.42.1e-141151343
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
              i n+ +r+ t+ kR+n ++KK  E+S+LC+++++ ii+ s+
  OIW14056 11 IVNDAKRNATYKKRKNSLIKKTMEISTLCGVDACAIIYRSN 51
              7899********************************99765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MARRNTKHAY IVNDAKRNAT YKKRKNSLIK KTMEISTLCG VDACAIIYRS NELQPEVWPS  60
HSGVQSVLYK FLTFPPLEQS RKMFDQQSFL KQRIVKAQDQ LQKKKIRNQN EMMSLFMFNC  120
LNTGFVNDNI NLQIAKDLLS VIDRNLNDLD RKITRDQHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.15e-38M-type_MADS family protein