PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW14060
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 202aa    MW: 23449.1 Da    PI: 10.1415
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW14060genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF51.31.5e-161152344
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
              i n+ +r+ t+ kR+n ++KK +E+S+LC++e + ii+ss+g
  OIW14060 11 IANDAKRNATYKKRKNSLIKKTKEISTLCGVETCAIIYSSNG 52
              89**************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MARRNTKLAY IANDAKRNAT YKKRKNSLIK KTKEISTLCG VETCAIIYSS NGLQPEVWPS  60
HFEVQKVLYK FLTMPPLEQS RKMFDQEMFL KQRIMKAQEQ LKKKKIQNRK EMMSLLMIKC  120
LSTGKVEENV NAQNANDLLW VIDENLKELD EKITRNQPQE GTPTNVNVQG MIQTNVNNGR  180
NEMVPFENFN ISNGFWHGPS IH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.18e-40M-type_MADS family protein