PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW14061
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 218aa    MW: 24913.5 Da    PI: 9.3231
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW14061genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF48.79.8e-161156348
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
              i n+ +r+ t+  R+ng++KK +E+S+LC++e++ ii+ +++ l e
  OIW14061 11 IANDAQRKATYKTRKNGLIKKTKEISTLCGVEACAIIYYPNQSLPE 56
              89************************************99999865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MARKKVKIAY IANDAQRKAT YKTRKNGLIK KTKEISTLCG VEACAIIYYP NQSLPEVWPS  60
HSDVQRILYK FMATPPLEQS KKMFNQEIFL MQRITKAREQ LKKKKSENRK EEMSLLMFNC  120
LSYTGSVAEN VNVKNANDLL WVIDQNLKEV DQKITRDQSQ EETLVASNSA YGLNGEMDPI  180
DRNVQEMMQN NANSGGNEMA PFGCFNISNG FSHGPFFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.13e-45M-type_MADS family protein