PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW14489

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

SBP

Protein Properties

Length: 340aa MW: 38466.6 Da PI: 8.6291

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW14489	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	127	7.4e-40	51	128	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +C v+gC+ dls++++yh+rh+vCe+h+k+p vlv g++qrfCqqCsrfh+l efD+ krsCr+rL++hn+rrrk+q+ OIW14489 51 CCLVDGCNFDLSDCRKYHKRHRVCEKHTKTPDVLVGGKQQRFCQQCSRFHALGEFDDVKRSCRKRLDGHNRRRRKPQP 128 6**************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MEWDWKEFTW DSSMLQVDNN KKHEAASVNS KSVLSSQGSL KQWHNGSQNL CCLVDGCNFD 60 LSDCRKYHKR HRVCEKHTKT PDVLVGGKQQ RFCQQCSRFH ALGEFDDVKR SCRKRLDGHN 120 RRRRKPQPPS LFMAAEKFLY NYKGPMILQF GNPQTYNMWP ATAKTGAESG YDDRRLLYRI 180 DKHNKQEKEH FLWQENVPKA SNCYEAKLGT SISQPNCGAN AISTPASGKK CIGKLSSDNK 240 LGSLDSSCVL YLLSTLKTQN SDLRMVQSST TYPIQSPFGS VNLDAIDEYL CSERAIGKPI 300 SPVFVLDANI ADLRCDSMLQ MGPGGLVKNE DSLTLPSFWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	109	126	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	6e-42	SBP family protein

Link Out ? help Back to Top
Ensembl	OIW14489