PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW14524

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MIKC_MADS

Protein Properties

Length: 163aa MW: 19163.6 Da PI: 6.1314

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW14524	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	90	1.2e-28	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtfskRrng++KKA+ELS+LCd+++a+i+fs++g+l +s OIW14524 9 KRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLNHFS 58 79********************************************9997 PP
2	K-box	19.1	5.6e-08	99	156	13	70
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKn 70 + e+lqqe+++L +++++ + ++R + + + s+++L++ e++L + l+++ ++K OIW14524 99 EIEELQQEVNRLHQQLQMTEAQIRIYEPDPSKMTSMEDLESTEKNLVDTLTRVMQRKV 156 5689***************************************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence
MGRVKLEIKR IENTTNRQVT FSKRRNGLIK KAYELSILCD IDIALIMFSP SGRLNHFSGR 60 RRIEDVFTRF INLPDQERDN AVNFPEPHYD RSPGDINCEI EELQQEVNRL HQQLQMTEAQ 120 IRIYEPDPSK MTSMEDLEST EKNLVDTLTR VMQRKVDNNH DTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22130.1	3e-70	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	OIW14524