PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW14652

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 355aa MW: 40927.1 Da PI: 6.5653

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW14652	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	79.6	4.5e-25	50	130	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li++rrem+ ++++k++k+lW+++s+kmre gf rsp +C++kw+nl k++kk k++++ + ++ +++ +++++ OIW14652 50 WVHDETRNLIALRREMDALFNTSKSNKHLWDQISAKMRENGFDRSPAMCTDKWRNLLKEFKKAKHQDNCG---NV-KMSCYKEID 130 *****************************************************************99965...44.456677665 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MIQLTATDNN HHHHHLLHPP PPPSLILTES SGDDPELDQF KAPKKRAETW VHDETRNLIA 60 LRREMDALFN TSKSNKHLWD QISAKMRENG FDRSPAMCTD KWRNLLKEFK KAKHQDNCGN 120 VKMSCYKEID EILRERVKNL QYKTPKVDTF MHFLDKGFED TSISFGPVEA TGRPTLNLER 180 SLDHDGHPLA ITSADAVAAS GIPPWNWRET PENGGESQPC CGRVISVKWG DYTRRIGIDG 240 TAGAIKEAIK AAFRLRTRRA FWLEDEEQII RSIDRDMPLG NYTLHLDEGM AVKICLYDES 300 DHISVHTEEK IFYTEDDYRD FLSRRGWTCL REFNGYRNID NMDDLRPGAI YRGVS

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MIQLTATDNN HHHHHLLHPP PPPSLILTES SGDDPELDQF KAPKKRAETW VHDETRNLIA  60
LRREMDALFN TSKSNKHLWD QISAKMRENG FDRSPAMCTD KWRNLLKEFK KAKHQDNCGN  120
VKMSCYKEID EILRERVKNL QYKTPKVDTF MHFLDKGFED TSISFGPVEA TGRPTLNLER  180
SLDHDGHPLA ITSADAVAAS GIPPWNWRET PENGGESQPC CGRVISVKWG DYTRRIGIDG  240
TAGAIKEAIK AAFRLRTRRA FWLEDEEQII RSIDRDMPLG NYTLHLDEGM AVKICLYDES  300
DHISVHTEEK IFYTEDDYRD FLSRRGWTCL REFNGYRNID NMDDLRPGAI YRGVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	1e-175	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW14652