PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW14764
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 272aa    MW: 32177.6 Da    PI: 8.7876
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW14764genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF66.72.4e-21949343
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
              i+ + nr +tf kR++g++KKA+ELS+LC+++v+vii++++
  OIW14764  9 IKKEKNRMITFQKRKEGLMKKAYELSTLCGIDVCVIIYAPH 49
              8999**********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MGRGRMELIK KEKNRMITFQ KRKEGLMKKA YELSTLCGID VCVIIYAPHF NDQGSQLQTW  60
PKDTKEVNRI IEKYKDTTID RSPKIYDVQE YYKDRVKKVE SEIAKVRREK LKIMYPTWDE  120
SFNVMGEQQL RMFVTMLDNK LDVCNQRINV LKQDHKGRVI TEEAPFKSEI CEGQVYGPSH  180
MKQDSDNKNH IPFYTFNHGQ NSQSSMLHFD QNMQTMLWPY DTSMQTPNNS QNLQNEAAFQ  240
IQPQGFQING FYDTNALQSQ MLNYMHGWNN RQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.18e-25M-type_MADS family protein