PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW15034

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 361aa MW: 40205.6 Da PI: 6.8422

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW15034	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.2	3.8e-07	146	167	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H OIW15034 146 FCEICGKGFRRDANLRMHMRAH 167 6*******************99 PP
2	zf-C2H2	13.6	0.0002	239	262	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+L++H++ + OIW15034 239 YSCNRCHkKNFSVLSDLRSHMKQC 262 99*******************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MQSPNSLIPL FQTHDPDPNP NPSNRVPLHN LFIIKTRLDS LHHFLSHSIN THTLLTNHQL 60 TSVSNDVVSS IHQLIVNGAA LISVDAKLPD PPEAPVTKPI LDKGKNLKIE VHDENGVEDF 120 DGGGGGGDCE IVELDAVELL AEHTHFCEIC GKGFRRDANL RMHMRAHGNK FKTPEALAKP 180 LPTEDEGSVS STRRRGVATQ FSCPFEGCNR NKGHKKFKAL KSIVCVKNHF KRSHCPKMYS 240 CNRCHKKNFS VLSDLRSHMK QCGECSKWKC SCGTTFSRKD KLFGHIALFE GHMPALAVDD 300 VEKGKKSAIA VAVEVDEDPM LINDFEFTEF GNCFVDDFDG DRFFDDLDKL DSFTSLDLPS 360 I

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MQSPNSLIPL FQTHDPDPNP NPSNRVPLHN LFIIKTRLDS LHHFLSHSIN THTLLTNHQL  60
TSVSNDVVSS IHQLIVNGAA LISVDAKLPD PPEAPVTKPI LDKGKNLKIE VHDENGVEDF  120
DGGGGGGDCE IVELDAVELL AEHTHFCEIC GKGFRRDANL RMHMRAHGNK FKTPEALAKP  180
LPTEDEGSVS STRRRGVATQ FSCPFEGCNR NKGHKKFKAL KSIVCVKNHF KRSHCPKMYS  240
CNRCHKKNFS VLSDLRSHMK QCGECSKWKC SCGTTFSRKD KLFGHIALFE GHMPALAVDD  300
VEKGKKSAIA VAVEVDEDPM LINDFEFTEF GNCFVDDFDG DRFFDDLDKL DSFTSLDLPS  360
I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.3	5e-73	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW15034