PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW15186

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 230aa MW: 25785.8 Da PI: 9.4004

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW15186	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.7	1e-05	65	87	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ Fs++ L H++ H OIW15186 65 YVCQYCDRKFSSSQALGGHQNAH 87 9*******************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MEDKKMKRKM NEAPTSGVAE SKRSQCLRLG SNPVVGESSS WKSSKKAYEP SNDRDDPKED 60 PPLKYVCQYC DRKFSSSQAL GGHQNAHKHE HERQLKKEKE KLLHGLQSDT SFSTRPYPSM 120 VNNYQHSPSH LYYGVRFQRP MAQIPSMSLP YHSSIGYGHY QGPHVPNPSL HGHQFMNVSS 180 SLGHGAIPPR YNNLQGLTHF QGQPHSGVGN PLENPSAPQA SEDIDLTLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06650.1	7e-07	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW15186