PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW15187

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 273aa MW: 30505.8 Da PI: 6.5101

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW15187	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.1	1.6e-05	78	100	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C++ Fs++ L H++ H OIW15187 78 HSCPYCDRKFSSPQALGGHQNAH 100 79******************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MPNIEEKKLK RKMDDEPIVD DADPQPLEAL RIGSNSIVDE STSRPFKSTR TSIECDSLVK 60 SSEPSNDREI KENIPLDHSC PYCDRKFSSP QALGGHQNAH KHERLLEKEK NKYMYGDEFG 120 SRYSRHEYSY LTNYYQGSSP LNLYHGVHLQ RPMAQIPSMS SPRLSSIAYG HHQGLHFPST 180 SFNAHPFGST SSWTDRGGGG AIPSRSNFQG LNLFGPMNQT SLPIINEANQ IQAHAGVRNY 240 LEDLRVSPAA SQASAEDPQA SEELDLSLRL SFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10970.1	2e-12	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW15187