PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW15302

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 315aa MW: 34045.2 Da PI: 6.6314

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW15302	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.0003	107	129	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs++ L H++ H OIW15302 107 FSCNFCKREFSSSQALGGHQNAH 129 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MEANGVDPCS SEASSISANS DDQKMNRKEK GVKSELDQAS ISNSSMQLLD FMKLNSNDNL 60 VSDSRAELDL LNQTGNNNLV GSSSRVNNKN SIAEVTDENT KIEAKSFSCN FCKREFSSSQ 120 ALGGHQNAHK QERALAKRRQ GLDASGGFGH PHYPYYPSYP TLSTHSFYGS YNRALGVRMD 180 SMIHKPSYPS WASPSGFSRY GSPWLRQGGR EMLNSSSSTL DRLRSEGFQL QSQSQSHVDG 240 GGRGFFIGSN ATSSIKDNDG NNASTETLSL STNIATTSSS QVINKPSQLL TVGDPAPEGI 300 SKAESSDDLD LSLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10970.1	7e-21	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW15302