PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW15331

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GRF

Protein Properties

Length: 498aa MW: 53760.6 Da PI: 7.6758

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW15331	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.1	1.5e-23	118	161	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v + +k+CErH+hrgr rsrk++e OIW15331 118 DPEPGRCRRTDGKKWRCSRDVAPSHKYCERHVHRGRPRSRKPVE 161 79***************************************987 PP
2	QLQ	55.8	1.4e-19	67	99	2	34
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqa 34 +FT+aQ+ +L++Q+++yKy++a++PvP++Ll + OIW15331 67 PFTNAQWKELERQAMIYKYMMASVPVPHDLLIP 99 8*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MSNHINLGTA TGSYSALGAD AGASATSSVP VRPLQQPFDI AAYYTSGITT YPAFKSSDVM 60 AASMGFPFTN AQWKELERQA MIYKYMMASV PVPHDLLIPT ASSSILNGGF NLRLSSSDPE 120 PGRCRRTDGK KWRCSRDVAP SHKYCERHVH RGRPRSRKPV EIHTNNTNNQ NQIKRVHHDC 180 NLFPTSDVSV AISNNFTTRK DGYSSQFIAS SANQQCLDSS SLSLHNFGVK SGNFDSVASV 240 SSNKAPKGLE CMLNGDPISL GASDSEFQFI MHNKVGLNTE PQYLNSFALH NSGVLDQQNQ 300 HPPMFLNPLD YPMENLQSRK PRGFIDAWSN TGTEESNGNN TNNKSSVASI GKFSLDLSMG 360 DDCVHEDIGT TDMGLGLMEH NGNNNTQHNE AKSHLSNWLT RTSTSPWVAS TTLGGPLAEV 420 LRLSTTTATN DGASNPSSPV ITHAESSTSP LGTLASSPSG VLQKTLASFL DSSSNSSPKV 480 ASSRASNSDI AMLRFIQK

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MSNHINLGTA TGSYSALGAD AGASATSSVP VRPLQQPFDI AAYYTSGITT YPAFKSSDVM  60
AASMGFPFTN AQWKELERQA MIYKYMMASV PVPHDLLIPT ASSSILNGGF NLRLSSSDPE  120
PGRCRRTDGK KWRCSRDVAP SHKYCERHVH RGRPRSRKPV EIHTNNTNNQ NQIKRVHHDC  180
NLFPTSDVSV AISNNFTTRK DGYSSQFIAS SANQQCLDSS SLSLHNFGVK SGNFDSVASV  240
SSNKAPKGLE CMLNGDPISL GASDSEFQFI MHNKVGLNTE PQYLNSFALH NSGVLDQQNQ  300
HPPMFLNPLD YPMENLQSRK PRGFIDAWSN TGTEESNGNN TNNKSSVASI GKFSLDLSMG  360
DDCVHEDIGT TDMGLGLMEH NGNNNTQHNE AKSHLSNWLT RTSTSPWVAS TTLGGPLAEV  420
LRLSTTTATN DGASNPSSPV ITHAESSTSP LGTLASSPSG VLQKTLASFL DSSSNSSPKV  480
ASSRASNSDI AMLRFIQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53660.1	1e-39	GRF family protein

Link Out ? help Back to Top
Ensembl	OIW15331