PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW15552

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HD-ZIP

Protein Properties

Length: 283aa MW: 32080.9 Da PI: 7.589

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW15552	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.2	1.4e-18	122	176	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq +Lee F ++++++ ++++eLA++l+L +rqV vWFqNrRa+ k OIW15552 122 RKKLRLTKEQSAVLEENFVEHSTLNPKQKQELAMNLNLRTRQVEVWFQNRRARTK 176 788899***********************************************98 PP
2	HD-ZIP_I/II	116.7	1.3e-37	122	210	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+keq+++LEe+F e+++L+p++K+ela +L+l++rqv+vWFqnrRARtk+kq+E+d+e Lk+ +++l+een+rL+ke +eL+ + OIW15552 122 RKKLRLTKEQSAVLEENFVEHSTLNPKQKQELAMNLNLRTRQVEVWFQNRRARTKLKQTETDCELLKKYCETLTEENKRLKKELQELK-S 210 69*************************************************************************************9.3 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MGFNDNSNTG IQLGLDLSLG QHDHHKQRDQ SHKERKDGPS TCNKAYPSLT LGLSDHGDEA 60 NNQPNSKTEI SSRSAVSSLV SNSSSIKRKR DNFLGEDFEV EVQKVTSNSK GGDVEDEVCN 120 TRKKLRLTKE QSAVLEENFV EHSTLNPKQK QELAMNLNLR TRQVEVWFQN RRARTKLKQT 180 ETDCELLKKY CETLTEENKR LKKELQELKS IETSPGPFPM QIPSATLIIC PSCERICNGN 240 INGYSPMTML HIGSKAHHHL YTENIHSPTH LGPDERNHCM IFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	127	TRKKLRL
2	171	179	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	1e-59	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	OIW15552