PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW15560

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GRF

Protein Properties

Length: 599aa MW: 65440.2 Da PI: 6.5984

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW15560	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.2	1.7e-24	218	262	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+++ ++k+CErH++rgr+rsrk++e+ OIW15560 218 DPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEQ 262 79****************************************997 PP
2	QLQ	61.7	2e-21	149	184	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT++Q+++L++Q+l+yKy+ an+PvP++Ll +i+k OIW15560 149 LFTPSQWMELEHQALIYKYITANVPVPSHLLIPIRK 184 6*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence
MDPEVVGFDG LVGSDTVTSS HGFVSNASDP ETKHKLYGSG GFLKQERSSA NVEDEWRSSK 60 VAKTNDDDIS GSSSKAMLFQ QRNSLLRSCN NNNGTVFCDG QQQMLSFSSP KPETSSNATL 120 HFSYQPYSRD AGYSSGSIIH GTITGGRGLF TPSQWMELEH QALIYKYITA NVPVPSHLLI 180 PIRKAIDSAG FYNFSTGVLR PNALGWGAFH FGFSNNTDPE PGRCRRTDGK KWRCSRDAVV 240 DQKYCERHMN RGRHRSRKPV EQGHLGHAGI VTASGTTATT TTTPNTTTCA SNSLNFVPHQ 300 EHKNMQLPLA SDTSPTININ RIFMNKDKEN DASERMQDSS SLPMLPPTLE LKPKENNTFM 360 IHKQQIQSFE GSTRNDNEFG LVTSDSLLNP SQKSSTLLGS RSFSSSHNQE TEPQHSLRHF 420 IDDCPNDDMQ SDSTQLSISI PMAASSDFMS FSSSTRTDEK LTLSPLRLSR ELDPIQMSLG 480 TGSSIDESNT RQANWIPITW ESCSMGGPLG EVLNLSNNNN NNASDHCSKN SSALNLMTDG 540 WDNSPPIGSS PTGILQKTAF GSLSNSSAGS SPRAVDTNKT QESATFCNEL IGSTMKPLL

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence

MDPEVVGFDG LVGSDTVTSS HGFVSNASDP ETKHKLYGSG GFLKQERSSA NVEDEWRSSK  60
VAKTNDDDIS GSSSKAMLFQ QRNSLLRSCN NNNGTVFCDG QQQMLSFSSP KPETSSNATL  120
HFSYQPYSRD AGYSSGSIIH GTITGGRGLF TPSQWMELEH QALIYKYITA NVPVPSHLLI  180
PIRKAIDSAG FYNFSTGVLR PNALGWGAFH FGFSNNTDPE PGRCRRTDGK KWRCSRDAVV  240
DQKYCERHMN RGRHRSRKPV EQGHLGHAGI VTASGTTATT TTTPNTTTCA SNSLNFVPHQ  300
EHKNMQLPLA SDTSPTININ RIFMNKDKEN DASERMQDSS SLPMLPPTLE LKPKENNTFM  360
IHKQQIQSFE GSTRNDNEFG LVTSDSLLNP SQKSSTLLGS RSFSSSHNQE TEPQHSLRHF  420
IDDCPNDDMQ SDSTQLSISI PMAASSDFMS FSSSTRTDEK LTLSPLRLSR ELDPIQMSLG  480
TGSSIDESNT RQANWIPITW ESCSMGGPLG EVLNLSNNNN NNASDHCSKN SSALNLMTDG  540
WDNSPPIGSS PTGILQKTAF GSLSNSSAGS SPRAVDTNKT QESATFCNEL IGSTMKPLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	5e-89	GRF family protein

Link Out ? help Back to Top
Ensembl	OIW15560