PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW15666

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 227aa MW: 26660.1 Da PI: 6.7616

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW15666	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.1	8.7e-18	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++ Edell +v+q+G g W++++++ g++R++k+c++rw++yl OIW15666 9 KGAWSKVEDELLRSCVEQYGEGKWHLVPKRAGLNRCRKSCRLRWLNYL 56 79********************************************97 PP
2	Myb_DNA-binding	52	1.6e-16	62	106	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +T+eE +l ++++k+lG++ W++Ia +++ gRt +++k++w++y OIW15666 62 RGEFTEEEVDLMIRLHKLLGNR-WSLIAGRLP-GRTSNDVKNYWNTY 106 899*****************.*****.**********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MDGSLGVRKG AWSKVEDELL RSCVEQYGEG KWHLVPKRAG LNRCRKSCRL RWLNYLKPNI 60 NRGEFTEEEV DLMIRLHKLL GNRWSLIAGR LPGRTSNDVK NYWNTYIRKK LPSQREDINE 120 RPKEIVREPS SVIKPQPWNI STKMPFLRDK EDHSEDKECI TNQGCLATAS ECNKENDTSW 180 FDVQDWTLLK DFNWDANLNS LTTNVEQFVV EDQSWSDVPF NINLWDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	2e-58	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW15666